RNA-Seq of Mycosphaerella fijiensis during association with Musa acum... - SRA

SRX1803265: RNA-Seq of Mycosphaerella fijiensis during association with Musa acuminata: symptomatic banana tissue, replicate 1
1 ILLUMINA (Illumina HiSeq 2500) run: 35.1M spots, 4.4G bases, 1.7Gb downloads

Design: RNA was isolated using the Spectrum Plant Total RNA kit (Sigma), and samples were DNase treated using DNase I (Roche). An NEBNext Ultra Directional library prep kit (New England BioLabs) was used to create strand-specific libraries.

Submitted by: North Carolina State University

Study: Study of Mycosphaerella fijiensis gene expression during association with banana compared to saprophytic growth

PRJNA323552 • SRP075820 • All experiments • All runs

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Mycosphaerella fijiensis during association with banana (Musa acuminata) versus during saprophytic growth in medium Transcriptome

Sample: Potted Grand Nain banana plants were inoculated with conidia of Mycosphaerella fijiensis isolate 14H1-11A, and symptomatic banana leaf tissue was harvested at 6 weeks post-inoculation and used for transcriptome sequencing.

SAMN05180972 • SRS1469564 • All experiments • All runs

Organism: Pseudocercospora fijiensis

Library:

Name: Plant tissue 1

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Runs: 1 run, 35.1M spots, 4.4G bases, 1.7Gb

Run	# of Spots	# of Bases	Size	Published
SRR3593874	35,090,280	4.4G	1.7Gb	2016-07-07

ID:: 2578963

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